ISMARA results: ELK1,4

Motif ID: ELK1,4_GABP{A,B1}.p3

$logo of ELK1,4_GABP{A,B1}.p3$

Gene Symbol	Entrez ID	Gene Name
ELK1	2002	ELK1, member of ETS oncogene family
ELK4	2005	ELK4, ETS-domain protein (SRF accessory protein 1)
GABPA	2551	GA binding protein transcription factor, alpha subunit 60kDa
GABPB1	2553	GA binding protein transcription factor, beta subunit 1

Gene	Promoter	Pearson	P-value	Plot
GABPB1	chr15_-_48434567	0.40	1.3e-01	Click!
GABPA	chr21_+_26029128	0.25	3.4e-01	Click!
ELK1	chrX_-_47394937	-0.23	3.9e-01	Click!
ELK4	chr1_-_203868622	0.23	4.0e-01	Click!

$activity profile for motif ELK1,4_GABP{A,B1}.p3$

$Sorted Z-values for motif ELK1,4_GABP{A,B1}.p3$

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Promoter	Score	Refseq	Gene Symbol	Gene Name
chr20_-_49008445	5.940	NM_003859	DPM1	dolichyl-phosphate mannosyltransferase polypeptide 1, catalytic subunit
chr8_+_38153453	4.343		BAG4	BCL2-associated athanogene 4
chr9_-_37775064	3.524	NM_016042 NM_001002269	EXOSC3	exosome component 3
chr9_-_37775052	3.471		EXOSC3	exosome component 3
chr6_-_166676016	3.318		SFT2D1	SFT2 domain containing 1
chrX_+_150316332	3.153		VMA21	VMA21 vacuolar H+-ATPase homolog (S. cerevisiae)
chr1_+_118273887	3.074	NM_006784	WDR3	WD repeat domain 3
chr7_-_128482059	3.028		TNPO3	transportin 3
chr6_-_28475478	2.983	NM_001163391	ZSCAN12	zinc finger and SCAN domain containing 12
chr9_-_37774785	2.966		EXOSC3	exosome component 3
chr11_+_118394350	2.903	NM_016146	TRAPPC4	trafficking protein particle complex 4
chr7_-_128482417	2.893	NM_001191028 NM_012470	TNPO3	transportin 3
chr8_+_38153514	2.865		BAG4	BCL2-associated athanogene 4
chr1_-_32888677	2.860	NM_178547	ZBTB8OS	zinc finger and BTB domain containing 8 opposite strand
chr10_-_15942461	2.855	NM_024948	FAM188A	family with sequence similarity 188, member A
chr3_+_15444056	2.796	NM_033083	EAF1	ELL associated factor 1
chr6_+_170705345	2.766	NM_001172085 NM_003194	TBP	TATA box binding protein
chr3_+_32701663	2.766	NM_015442	CNOT10	CCR4-NOT transcription complex, subunit 10
chr2_-_174968595	2.751	NM_004882	CIR1	corepressor interacting with RBPJ, 1
chr11_+_118394703	2.742		TRAPPC4	trafficking protein particle complex 4

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enrichment	p-value	GO term	description
3.04	3.26e-02	GO:0006362	transcription elongation from RNA polymerase I promoter
2.96	7.75e-05	GO:0000245	spliceosome assembly
2.87	2.39e-02	GO:0006360	transcription from RNA polymerase I promoter
2.87	2.39e-02	GO:0006361	transcription initiation from RNA polymerase I promoter
2.84	1.97e-03	GO:0000387	spliceosomal snRNP assembly
2.65	1.90e-04	GO:0006369	termination of RNA polymerase II transcription
2.62	4.01e-09	GO:0006353	transcription termination, DNA-dependent
2.61	2.65e-02	GO:0009452	RNA capping
2.52	2.21e-09	GO:0071826	ribonucleoprotein complex subunit organization
2.52	9.65e-09	GO:0022618	ribonucleoprotein complex assembly
2.51	2.62e-03	GO:0006283	transcription-coupled nucleotide-excision repair
2.48	6.19e-08	GO:0000216	M/G1 transition of mitotic cell cycle
2.47	1.73e-05	GO:0006368	transcription elongation from RNA polymerase II promoter
2.44	3.84e-07	GO:0006354	transcription elongation, DNA-dependent
2.41	4.67e-04	GO:0006521	regulation of cellular amino acid metabolic process
2.38	5.28e-19	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile
2.38	5.28e-19	GO:0000398	nuclear mRNA splicing, via spliceosome
2.36	5.22e-19	GO:0000375	RNA splicing, via transesterification reactions
2.35	3.88e-07	GO:0006415	translational termination
2.35	3.69e-03	GO:0050434	positive regulation of viral transcription

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enrichment	p-value	GO term	description
2.87	4.25e-03	GO:0005689	U12-type spliceosomal complex
2.79	2.87e-04	GO:0030532	small nuclear ribonucleoprotein complex
2.71	5.01e-12	GO:0071013	catalytic step 2 spliceosome
2.54	4.10e-17	GO:0005681	spliceosomal complex
2.42	1.32e-02	GO:0022627	cytosolic small ribosomal subunit
2.35	1.87e-05	GO:0000502	proteasome complex
2.34	1.74e-06	GO:0022626	cytosolic ribosome
2.30	6.83e-03	GO:0015030	Cajal body
2.21	2.36e-03	GO:0005798	Golgi-associated vesicle
2.14	1.57e-04	GO:0016591	DNA-directed RNA polymerase II, holoenzyme
2.09	5.01e-03	GO:0015934	large ribosomal subunit
2.06	3.10e-04	GO:0000790	nuclear chromatin
2.02	3.32e-30	GO:0030529	ribonucleoprotein complex
2.00	1.73e-02	GO:0044450	microtubule organizing center part
1.99	5.87e-07	GO:0000151	ubiquitin ligase complex
1.95	3.74e-07	GO:0044445	cytosolic part
1.94	1.37e-08	GO:0005840	ribosome
1.92	4.19e-05	GO:0016607	nuclear speck
1.87	3.95e-09	GO:0016604	nuclear body
1.85	1.20e-02	GO:0042470	melanosome

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Showing 1 to 20 of 42 entries

enrichment	p-value	GO term	description
2.15	3.50e-02	GO:0003743	translation initiation factor activity
2.03	1.02e-03	GO:0008135	translation factor activity, nucleic acid binding
1.95	1.11e-06	GO:0003735	structural constituent of ribosome
1.85	2.59e-02	GO:0008565	protein transporter activity
1.80	1.06e-02	GO:0008026	ATP-dependent helicase activity
1.80	1.06e-02	GO:0070035	purine NTP-dependent helicase activity
1.79	6.87e-04	GO:0004386	helicase activity
1.77	1.59e-06	GO:0004842	ubiquitin-protein ligase activity
1.76	8.48e-07	GO:0019787	small conjugating protein ligase activity
1.74	2.66e-26	GO:0003723	RNA binding
1.72	3.25e-02	GO:0051082	unfolded protein binding
1.70	1.04e-03	GO:0008168	methyltransferase activity
1.68	2.63e-06	GO:0016881	acid-amino acid ligase activity
1.65	3.66e-03	GO:0016741	transferase activity, transferring one-carbon groups
1.64	3.11e-06	GO:0016879	ligase activity, forming carbon-nitrogen bonds
1.56	1.36e-07	GO:0016874	ligase activity
1.51	4.17e-03	GO:0042623	ATPase activity, coupled
1.44	3.11e-03	GO:0003712	transcription cofactor activity
1.44	3.64e-03	GO:0000988	protein binding transcription factor activity
1.44	3.64e-03	GO:0000989	transcription factor binding transcription factor activity